BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H03SP1|AL428797
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1579 1734 0.0
>3x_Contig1579
Length = 11264
Score = 1734 bits (874), Expect = 0.0
Identities = 878/880 (99%)
Strand = Plus / Minus
Query: 1 ccaaaggctcatcahatttttcgctttatctttaatcatgaatcacacaataaaaatatt 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7161 ccaaaggctcatcatctttttcgctttatctttaatcatgaatcacacaataaaaatatt 7102
Query: 61 acatcgggagaccttatccatcaaagatgacctgcgattgactggccaaaaaatcaagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7101 acatcgggagaccttatccatcaaagatgacctgcgattgactggccaaaaaatcaagcg 7042
Query: 121 caaatactaattgaaaccatcgtatccctaaaatgggatgcaagaaaggcttgaataagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7041 caaatactaattgaaaccatcgtatccctaaaatgggatgcaagaaaggcttgaataagt 6982
Query: 181 actaaataagccctttaacggatacaatttgacacttttacagcgccttttgttcaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6981 actaaataagccctttaacggatacaatttgacacttttacagcgccttttgttcaggtt 6922
Query: 241 gatagatagtgcgagcttgatagagactgataaaatgaaaaatgaaaatggaaatggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6921 gatagatagtgcgagcttgatagagactgataaaatgaaaaatgaaaatggaaatggatt 6862
Query: 301 ggtggcatggatttcccttactactcagaagcaattagggagggccgggaattcagttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6861 ggtggcatggatttcccttactactcagaagcaattagggagggccgggaattcagttcc 6802
Query: 361 gtcaaagttacccgtacgttacgggatctcaattccgttcatgtgtgttctcatctgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6801 gtcaaagttacccgtacgttacgggatctcaattccgttcatgtgtgttctcatctgatt 6742
Query: 421 tcatttccaaacaaatgtgagcctaaaggaaatccatagcgaagtgaaaagggaaggagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6741 tcatttccaaacaaatgtgagcctaaaggaaatccatagcgaagtgaaaagggaaggagg 6682
Query: 481 gaaggttaccaggtcacgtgaatcagctcaggttgttctgcgactgagtcacgtgatagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6681 gaaggttaccaggtcacgtgaatcagctcaggttgttctgcgactgagtcacgtgatagg 6622
Query: 541 ttcatccatgtcaatagtgtgtgtgtatatttgatcgaccttagctcgtcgtccttgtct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6621 ttcatccatgtcaatagtgtgtgtgtatatttgatcgaccttagctcgtcgtccttgtct 6562
Query: 601 attgattcgtcttggagtttttgtttcttgtattctggtgtgtctacgaagattggatcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6561 attgattcgtcttggagtttttgtttcttgtattctggtgtgtctacgaagattggatcg 6502
Query: 661 agtggtttacgtttcttattgagtgaaggatctgcgttgtcaatactgttgttactgttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6501 agtggtttacgtttcttattgagtgaaggatctgcgttgtcaatactgttgttactgttg 6442
Query: 721 ttggcgctattgagatcaccttcccaatcgatcttttcgtcagttcgagaaaatgtcaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6441 ttggcgctattgagatcaccttcccaatcgatcttttcgtcagttcgagaaaatgtcaac 6382
Query: 781 tgcttggaatgtattctactgctttgtaggtatagtagtactttcaaatgtcgcagtacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6381 tgcttggaatgtattctactgctttgtaggtatagtagtactttcaaatgtcgcagtacg 6322
Query: 841 tttttgtttctgaatatcttacccctttccatttcaattt 880
||||||||||||||||||||||||||||||||||||||||
Sbjct: 6321 tttttgtttctgaatatcttacccctttccatttcaattt 6282
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7105
Number of Sequences: 1807
Number of extensions: 7105
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)